WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

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mRNA :

WormMine ID  Transcript:Y105C5A.13a.1 Sequence Name  Y105C5A.13a.1
Length (nt)  368   Chromosome Location  IV: 15641231-15643828
Chromosome . Primary Identifier  IV Chromosome Location . Start  15641231
Chromosome Location . End  15643828 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y105C5A.13a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00013637 Y105C5A.13 Y105C5A.13 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y105C5A.13a Y105C5A.13a 345   IV: 15641231-15641339

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:Y105C5A.13a.1 15641231 15643828 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

3 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon160850   109   IV: 15641231-15641339 Caenorhabditis elegans
Exon160853   144   IV: 15643523-15643666 Caenorhabditis elegans
Exon160856   115   IV: 15643714-15643828 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:Y105C5A.13a.1 15641231 15643828 1

1 Sequence

Length
368

1 Sequence Ontology Term

Identifier Name Description
transcript