WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:Y105C5A.12.1 Sequence Name  Y105C5A.12.1
Length (nt)  277   Chromosome Location  IV: 15641476-15641799
Chromosome . Primary Identifier  IV Chromosome Location . Start  15641476
Chromosome Location . End  15641799 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y105C5A.12.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00013636 Y105C5A.12 Y105C5A.12 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y105C5A.12 Y105C5A.12 231   IV: 15641512-15641603

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:Y105C5A.12.1 15641476 15641799 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

2 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon160851   128   IV: 15641476-15641603 Caenorhabditis elegans
Exon160852   149   IV: 15641651-15641799 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:Y105C5A.12.1 15641476 15641799 -1

1 Sequence

Length
277

1 Sequence Ontology Term

Identifier Name Description
transcript