WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:Y105C5A.15c.1 Sequence Name  Y105C5A.15c.1
Length (nt)  2580   Chromosome Location  IV: 15689201-15721805
Chromosome . Primary Identifier  IV Chromosome Location . Start  15689201
Chromosome Location . End  15721805 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y105C5A.15c.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00013639 Y105C5A.15 Y105C5A.15 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y105C5A.15c Y105C5A.15c 2580   IV: 15689201-15689256

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:Y105C5A.15c.1 15689201 15721805 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

11 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon161055   56   IV: 15689201-15689256 Caenorhabditis elegans
Exon161116   154   IV: 15703360-15703513 Caenorhabditis elegans
Exon161126   148   IV: 15705391-15705538 Caenorhabditis elegans
Exon161164   176   IV: 15712868-15713043 Caenorhabditis elegans
Exon161175   84   IV: 15714094-15714177 Caenorhabditis elegans
Exon161182   141   IV: 15714312-15714452 Caenorhabditis elegans
Exon161200   342   IV: 15718120-15718461 Caenorhabditis elegans
Exon161204   377   IV: 15718933-15719309 Caenorhabditis elegans
Exon161210   166   IV: 15719364-15719529 Caenorhabditis elegans
Exon161220   731   IV: 15720325-15721055 Caenorhabditis elegans
Exon161226   205   IV: 15721601-15721805 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:Y105C5A.15c.1 15689201 15721805 1

1 Sequence

Length
2580

1 Sequence Ontology Term

Identifier Name Description
transcript