WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:Y105C5A.15a.1 Sequence Name  Y105C5A.15a.1
Length (nt)  3463   Chromosome Location  IV: 15703354-15722553
Chromosome . Primary Identifier  IV Chromosome Location . Start  15703354
Chromosome Location . End  15722553 Method  Coding_transcript
Quick Links:
 
Quick Links:
 

1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y105C5A.15a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00013639 Y105C5A.15 Y105C5A.15 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y105C5A.15a Y105C5A.15a 2289   IV: 15710976-15711051

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:Y105C5A.15a.1 15703354 15722553 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

12 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon161115   160   IV: 15703354-15703513 Caenorhabditis elegans
Exon161125   148   IV: 15705391-15705538 Caenorhabditis elegans
Exon161144   97   IV: 15710803-15710899 Caenorhabditis elegans
Exon161146   97   IV: 15710955-15711051 Caenorhabditis elegans
Exon161162   176   IV: 15712868-15713043 Caenorhabditis elegans
Exon161173   84   IV: 15714094-15714177 Caenorhabditis elegans
Exon161180   141   IV: 15714312-15714452 Caenorhabditis elegans
Exon161198   342   IV: 15718120-15718461 Caenorhabditis elegans
Exon161206   368   IV: 15718942-15719309 Caenorhabditis elegans
Exon161208   166   IV: 15719364-15719529 Caenorhabditis elegans
Exon161218   731   IV: 15720325-15721055 Caenorhabditis elegans
Exon161229   953   IV: 15721601-15722553 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:Y105C5A.15a.1 15703354 15722553 1

1 Sequence

Length
3463

1 Sequence Ontology Term

Identifier Name Description
transcript