WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:Y105C5A.1270.1 Sequence Name  Y105C5A.1270.1
Length (nt)  422   Chromosome Location  IV: 15845933-15846653
Chromosome . Primary Identifier  IV Chromosome Location . Start  15845933
Chromosome Location . End  15846653 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y105C5A.1270.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00194646 Y105C5A.1270 Y105C5A.1270 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y105C5A.1270 Y105C5A.1270 336   IV: 15846017-15846149

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:Y105C5A.1270.1 15845933 15846653 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

2 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon161785   217   IV: 15845933-15846149 Caenorhabditis elegans
Exon161787   205   IV: 15846449-15846653 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:Y105C5A.1270.1 15845933 15846653 -1

1 Sequence

Length
422

1 Sequence Ontology Term

Identifier Name Description
transcript