WormMine

WS297

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:Y105C5B.4.1 Sequence Name  Y105C5B.4.1
Length (nt)  1368   Chromosome Location  IV: 15891654-15894233
Chromosome . Primary Identifier  IV Chromosome Location . Start  15891654
Chromosome Location . End  15894233 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y105C5B.4.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00005725 srv-14 Y105C5B.4 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y105C5B.4 Y105C5B.4 993   IV: 15892025-15892027

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:Y105C5B.4.1 15891654 15894233 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

6 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon162098   374   IV: 15891654-15892027 Caenorhabditis elegans
Exon162101   148   IV: 15892077-15892224 Caenorhabditis elegans
Exon162102   300   IV: 15892274-15892573 Caenorhabditis elegans
Exon162106   137   IV: 15893000-15893136 Caenorhabditis elegans
Exon162109   200   IV: 15893335-15893534 Caenorhabditis elegans
Exon162111   209   IV: 15894025-15894233 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:Y105C5B.4.1 15891654 15894233 -1

1 Sequence

Length
1368

1 Sequence Ontology Term

Identifier Name Description
transcript