WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:Y105C5B.15b.1 Sequence Name  Y105C5B.15b.1
Length (nt)  1095   Chromosome Location  IV: 15952540-15954812
Chromosome . Primary Identifier  IV Chromosome Location . Start  15952540
Chromosome Location . End  15954812 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y105C5B.15b.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00013654 Y105C5B.15 Y105C5B.15 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y105C5B.15b Y105C5B.15b 1095   IV: 15952540-15952678

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:Y105C5B.15b.1 15952540 15954812 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

4 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon162381   139   IV: 15952540-15952678 Caenorhabditis elegans
Exon162386   275   IV: 15953154-15953428 Caenorhabditis elegans
Exon162393   501   IV: 15953994-15954494 Caenorhabditis elegans
Exon162395   180   IV: 15954633-15954812 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:Y105C5B.15b.1 15952540 15954812 1

1 Sequence

Length
1095

1 Sequence Ontology Term

Identifier Name Description
transcript