WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:Y105C5B.19.1 Sequence Name  Y105C5B.19.1
Length (nt)  1558   Chromosome Location  IV: 15981575-15983970
Chromosome . Primary Identifier  IV Chromosome Location . Start  15981575
Chromosome Location . End  15983970 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y105C5B.19.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00013658 Y105C5B.19 Y105C5B.19 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y105C5B.19 Y105C5B.19 1455   IV: 15981678-15981801

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:Y105C5B.19.1 15981575 15983970 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

7 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon162538   227   IV: 15981575-15981801 Caenorhabditis elegans
Exon162539   108   IV: 15981848-15981955 Caenorhabditis elegans
Exon162540   91   IV: 15982001-15982091 Caenorhabditis elegans
Exon162542   97   IV: 15982181-15982277 Caenorhabditis elegans
Exon162543   234   IV: 15982340-15982573 Caenorhabditis elegans
Exon162544   138   IV: 15982622-15982759 Caenorhabditis elegans
Exon162545   663   IV: 15983308-15983970 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:Y105C5B.19.1 15981575 15983970 -1

1 Sequence

Length
1558

1 Sequence Ontology Term

Identifier Name Description
transcript