WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:Y105C5B.25a Sequence Name  Y105C5B.25a
Length (nt)  1389   Chromosome Location  IV: 16142544-16142796
Chromosome . Primary Identifier  IV Chromosome Location . Start  16142544
Chromosome Location . End  16142796
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y105C5B.25a

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE24075 Y105C5B.25, isoform a 53.7 462 Caenorhabditis elegans
 

Other

2 RNAi

WormBase ID
WBRNAi00055201
WBRNAi00036478

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:Y105C5B.25a 16142544 16142796 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00013662 Y105C5B.25 Y105C5B.25 Caenorhabditis elegans

9 Locations


Feature . Primary Identifier
Start End Strand
CDS:Y105C5B.25a 16142544 16142796 -1
CDS:Y105C5B.25a 16143439 16143524 -1
CDS:Y105C5B.25a 16143566 16143853 -1
CDS:Y105C5B.25a 16144658 16144736 -1
CDS:Y105C5B.25a 16144783 16144856 -1
CDS:Y105C5B.25a 16145235 16145332 -1
CDS:Y105C5B.25a 16145877 16146162 -1
CDS:Y105C5B.25a 16146786 16146928 -1
CDS:Y105C5B.25a 16147061 16147142 -1

1 Sequence

Length
1389

1 Sequence Ontology Term

Identifier Name Description
CDS  

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:Y105C5B.25a.1 Y105C5B.25a.1 1402   IV: 16142544-16147155