WormMine

WS296

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:H25K10.5 Sequence Name  H25K10.5
Length (nt)  1551   Chromosome Location  IV: 16230452-16230537
Chromosome . Primary Identifier  IV Chromosome Location . Start  16230452
Chromosome Location . End  16230537
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
H25K10.5

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE19937 HPA-1 58.9 516 Caenorhabditis elegans
 

Other

2 RNAi

WormBase ID
WBRNAi00049489
WBRNAi00016320

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:H25K10.5 16230452 16230537 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00010414 hpa-1 H25K10.5 Caenorhabditis elegans

8 Locations


Feature . Primary Identifier
Start End Strand
CDS:H25K10.5 16230452 16230537 -1
CDS:H25K10.5 16230596 16230725 -1
CDS:H25K10.5 16230771 16230838 -1
CDS:H25K10.5 16230891 16231269 -1
CDS:H25K10.5 16232091 16232374 -1
CDS:H25K10.5 16232423 16232617 -1
CDS:H25K10.5 16232675 16232923 -1
CDS:H25K10.5 16232969 16233128 -1

1 Sequence

Length
1551

1 Sequence Ontology Term

Identifier Name Description
CDS  

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:H25K10.5.1 H25K10.5.1 1648   IV: 16230355-16233128