WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:H25K10.6.1 Sequence Name  H25K10.6.1
Length (nt)  1479   Chromosome Location  IV: 16233148-16236555
Chromosome . Primary Identifier  IV Chromosome Location . Start  16233148
Chromosome Location . End  16236555 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
H25K10.6.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00010415 irld-39 H25K10.6 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:H25K10.6 H25K10.6 1479   IV: 16233148-16233244

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:H25K10.6.1 16233148 16236555 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

6 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon163827   97   IV: 16233148-16233244 Caenorhabditis elegans
Exon163828   255   IV: 16234946-16235200 Caenorhabditis elegans
Exon163829   201   IV: 16235253-16235453 Caenorhabditis elegans
Exon163830   290   IV: 16235532-16235821 Caenorhabditis elegans
Exon163831   438   IV: 16235866-16236303 Caenorhabditis elegans
Exon163832   198   IV: 16236358-16236555 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:H25K10.6.1 16233148 16236555 1

1 Sequence

Length
1479

1 Sequence Ontology Term

Identifier Name Description
transcript