WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:H25K10.7a.1 Sequence Name  H25K10.7a.1
Length (nt)  1188   Chromosome Location  IV: 16236732-16238655
Chromosome . Primary Identifier  IV Chromosome Location . Start  16236732
Chromosome Location . End  16238655 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
H25K10.7a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00005808 srw-61 H25K10.7 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:H25K10.7a H25K10.7a 1188   IV: 16236732-16236809

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:H25K10.7a.1 16236732 16238655 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

5 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon163834   78   IV: 16236732-16236809 Caenorhabditis elegans
Exon163836   148   IV: 16236858-16237005 Caenorhabditis elegans
Exon163838   218   IV: 16237264-16237481 Caenorhabditis elegans
Exon163840   397   IV: 16237551-16237947 Caenorhabditis elegans
Exon163842   347   IV: 16238309-16238655 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:H25K10.7a.1 16236732 16238655 -1

1 Sequence

Length
1188

1 Sequence Ontology Term

Identifier Name Description
transcript