WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F38C2.1b.1 Sequence Name  F38C2.1b.1
Length (nt)  357   Chromosome Location  IV: 16247431-16251790
Chromosome . Primary Identifier  IV Chromosome Location . Start  16247431
Chromosome Location . End  16251790 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F38C2.1b.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00009535 F38C2.1 F38C2.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F38C2.1b F38C2.1b 357   IV: 16247431-16247440

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F38C2.1b.1 16247431 16251790 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

4 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon163861   10   IV: 16247431-16247440 Caenorhabditis elegans
Exon163872   141   IV: 16249777-16249917 Caenorhabditis elegans
Exon163875   151   IV: 16250101-16250251 Caenorhabditis elegans
Exon163883   55   IV: 16251736-16251790 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F38C2.1b.1 16247431 16251790 1

1 Sequence

Length
357

1 Sequence Ontology Term

Identifier Name Description
transcript