WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:F38C2.2 Sequence Name  F38C2.2
Length (nt)  306   Chromosome Location  IV: 16254871-16254941
Chromosome . Primary Identifier  IV Chromosome Location . Start  16254871
Chromosome Location . End  16254941
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F38C2.2

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE42757 HLH-17 11.3 101 Caenorhabditis elegans
 

Other

4 RNAi

WormBase ID
WBRNAi00046700
WBRNAi00061128
WBRNAi00061129
WBRNAi00061130

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:F38C2.2 16254871 16254941 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00001961 hlh-17 F38C2.2 Caenorhabditis elegans

3 Locations


Feature . Primary Identifier
Start End Strand
CDS:F38C2.2 16254871 16254941 1
CDS:F38C2.2 16255552 16255684 1
CDS:F38C2.2 16256043 16256144 1

1 Sequence

Length
306

1 Sequence Ontology Term

Identifier Name Description
CDS  

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:F38C2.2.1 F38C2.2.1 543   IV: 16254764-16256274