WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:Y7A9C.7.1 Sequence Name  Y7A9C.7.1
Length (nt)  936   Chromosome Location  IV: 16299151-16300272
Chromosome . Primary Identifier  IV Chromosome Location . Start  16299151
Chromosome Location . End  16300272 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y7A9C.7.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00023514 srz-72 Y7A9C.7 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y7A9C.7 Y7A9C.7 936   IV: 16299151-16299315

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:Y7A9C.7.1 16299151 16300272 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

5 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon164047   165   IV: 16299151-16299315 Caenorhabditis elegans
Exon164048   104   IV: 16299367-16299470 Caenorhabditis elegans
Exon164049   271   IV: 16299514-16299784 Caenorhabditis elegans
Exon164050   162   IV: 16299829-16299990 Caenorhabditis elegans
Exon164051   234   IV: 16300039-16300272 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:Y7A9C.7.1 16299151 16300272 1

1 Sequence

Length
936

1 Sequence Ontology Term

Identifier Name Description
transcript