WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:Y7A9D.1.1 Sequence Name  Y7A9D.1.1
Length (nt)  563   Chromosome Location  IV: 16381378-16382215
Chromosome . Primary Identifier  IV Chromosome Location . Start  16381378
Chromosome Location . End  16382215 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y7A9D.1.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00012420 spig-12 Y7A9D.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y7A9D.1 Y7A9D.1 348   IV: 16381555-16381794

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:Y7A9D.1.1 16381378 16382215 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

2 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon164294   417   IV: 16381378-16381794 Caenorhabditis elegans
Exon164297   146   IV: 16382070-16382215 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:Y7A9D.1.1 16381378 16382215 -1

1 Sequence

Length
563

1 Sequence Ontology Term

Identifier Name Description
transcript