WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:Y65A5A.2c.1 Sequence Name  Y65A5A.2c.1
Length (nt)  564   Chromosome Location  IV: 16414840-16416683
Chromosome . Primary Identifier  IV Chromosome Location . Start  16414840
Chromosome Location . End  16416683 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y65A5A.2c.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00013419 Y65A5A.2 Y65A5A.2 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y65A5A.2c Y65A5A.2c 564   IV: 16414840-16415059

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:Y65A5A.2c.1 16414840 16416683 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

3 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon164376   220   IV: 16414840-16415059 Caenorhabditis elegans
Exon164378   163   IV: 16416080-16416242 Caenorhabditis elegans
Exon164381   181   IV: 16416503-16416683 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:Y65A5A.2c.1 16414840 16416683 1

1 Sequence

Length
564

1 Sequence Ontology Term

Identifier Name Description
transcript