WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:Y10G11A.2a.1 Sequence Name  Y10G11A.2a.1
Length (nt)  422   Chromosome Location  IV: 16432229-16437953
Chromosome . Primary Identifier  IV Chromosome Location . Start  16432229
Chromosome Location . End  16437953 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y10G11A.2a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00012424 dlc-3 Y10G11A.2 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y10G11A.2a Y10G11A.2a 336   IV: 16432251-16432288

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:Y10G11A.2a.1 16432229 16437953 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

3 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon164393   60   IV: 16432229-16432288 Caenorhabditis elegans
Exon164404   191   IV: 16436321-16436511 Caenorhabditis elegans
Exon164417   171   IV: 16437783-16437953 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:Y10G11A.2a.1 16432229 16437953 1

1 Sequence

Length
422

1 Sequence Ontology Term

Identifier Name Description
transcript