WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:Y10G11A.2b.1 Sequence Name  Y10G11A.2b.1
Length (nt)  518   Chromosome Location  IV: 16434117-16437958
Chromosome . Primary Identifier  IV Chromosome Location . Start  16434117
Chromosome Location . End  16437958 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y10G11A.2b.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00012424 dlc-3 Y10G11A.2 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y10G11A.2b Y10G11A.2b 390   IV: 16434176-16434267

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:Y10G11A.2b.1 16434117 16437958 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

3 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon164397   151   IV: 16434117-16434267 Caenorhabditis elegans
Exon164405   191   IV: 16436321-16436511 Caenorhabditis elegans
Exon164418   176   IV: 16437783-16437958 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:Y10G11A.2b.1 16434117 16437958 1

1 Sequence

Length
518

1 Sequence Ontology Term

Identifier Name Description
transcript