WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:Y51H4A.7.2 Sequence Name  Y51H4A.7.2
Length (nt)  2111   Chromosome Location  IV: 16535725-16542332
Chromosome . Primary Identifier  IV Chromosome Location . Start  16535725
Chromosome Location . End  16542332 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y51H4A.7.2

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00013103 uroc-1 Y51H4A.7 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y51H4A.7 Y51H4A.7 2013   IV: 16535813-16536105

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:Y51H4A.7.2 16535725 16542332 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

9 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon164718   381   IV: 16535725-16536105 Caenorhabditis elegans
Exon164723   294   IV: 16536247-16536540 Caenorhabditis elegans
Exon164733   122   IV: 16538290-16538411 Caenorhabditis elegans
Exon164735   342   IV: 16538464-16538805 Caenorhabditis elegans
Exon164738   293   IV: 16539077-16539369 Caenorhabditis elegans
Exon164746   129   IV: 16540762-16540890 Caenorhabditis elegans
Exon164748   142   IV: 16540937-16541078 Caenorhabditis elegans
Exon164750   272   IV: 16541125-16541396 Caenorhabditis elegans
Exon164758   136   IV: 16542197-16542332 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:Y51H4A.7.2 16535725 16542332 -1

1 Sequence

Length
2111

1 Sequence Ontology Term

Identifier Name Description
transcript