WormMine

WS297

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:Y51H4A.7.1 Sequence Name  Y51H4A.7.1
Length (nt)  2140   Chromosome Location  IV: 16535730-16542749
Chromosome . Primary Identifier  IV Chromosome Location . Start  16535730
Chromosome Location . End  16542749 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y51H4A.7.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00013103 uroc-1 Y51H4A.7 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y51H4A.7 Y51H4A.7 2013   IV: 16535813-16536105

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:Y51H4A.7.1 16535730 16542749 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

10 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon164774   376   IV: 16535730-16536105 Caenorhabditis elegans
Exon164777   294   IV: 16536247-16536540 Caenorhabditis elegans
Exon164787   122   IV: 16538290-16538411 Caenorhabditis elegans
Exon164789   342   IV: 16538464-16538805 Caenorhabditis elegans
Exon164792   293   IV: 16539077-16539369 Caenorhabditis elegans
Exon164800   129   IV: 16540762-16540890 Caenorhabditis elegans
Exon164802   142   IV: 16540937-16541078 Caenorhabditis elegans
Exon164804   272   IV: 16541125-16541396 Caenorhabditis elegans
Exon164812   127   IV: 16542197-16542323 Caenorhabditis elegans
Exon164815   43   IV: 16542707-16542749 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:Y51H4A.7.1 16535730 16542749 -1

1 Sequence

Length
2140

1 Sequence Ontology Term

Identifier Name Description
transcript