WormMine

WS297

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:Y51H4A.13.1 Sequence Name  Y51H4A.13.1
Length (nt)  1847   Chromosome Location  IV: 16641679-16646373
Chromosome . Primary Identifier  IV Chromosome Location . Start  16641679
Chromosome Location . End  16646373 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y51H4A.13.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00013107 Y51H4A.13 Y51H4A.13 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y51H4A.13 Y51H4A.13 1644   IV: 16641793-16642083

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:Y51H4A.13.1 16641679 16646373 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

6 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon165274   405   IV: 16641679-16642083 Caenorhabditis elegans
Exon165275   168   IV: 16642146-16642313 Caenorhabditis elegans
Exon165276   412   IV: 16643026-16643437 Caenorhabditis elegans
Exon165277   291   IV: 16643486-16643776 Caenorhabditis elegans
Exon165278   333   IV: 16644760-16645092 Caenorhabditis elegans
Exon165279   238   IV: 16646136-16646373 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:Y51H4A.13.1 16641679 16646373 -1

1 Sequence

Length
1847

1 Sequence Ontology Term

Identifier Name Description
transcript