WormMine

WS297

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:Y51H4A.12.1 Sequence Name  Y51H4A.12.1
Length (nt)  5322   Chromosome Location  IV: 16646791-16655883
Chromosome . Primary Identifier  IV Chromosome Location . Start  16646791
Chromosome Location . End  16655883 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y51H4A.12.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00013106 set-26 Y51H4A.12 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y51H4A.12 Y51H4A.12 4938   IV: 16647125-16647168

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:Y51H4A.12.1 16646791 16655883 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

9 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon165280   378   IV: 16646791-16647168 Caenorhabditis elegans
Exon165281   265   IV: 16647300-16647564 Caenorhabditis elegans
Exon165282   794   IV: 16648220-16649013 Caenorhabditis elegans
Exon165283   274   IV: 16649547-16649820 Caenorhabditis elegans
Exon165284   1836   IV: 16650303-16652138 Caenorhabditis elegans
Exon165285   907   IV: 16653077-16653983 Caenorhabditis elegans
Exon165286   341   IV: 16654878-16655218 Caenorhabditis elegans
Exon165287   371   IV: 16655306-16655676 Caenorhabditis elegans
Exon165288   156   IV: 16655728-16655883 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:Y51H4A.12.1 16646791 16655883 -1

1 Sequence

Length
5322

1 Sequence Ontology Term

Identifier Name Description
transcript