WormMine

WS297

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:Y51H4A.25e.1 Sequence Name  Y51H4A.25e.1
Length (nt)  1870   Chromosome Location  IV: 16738912-16743259
Chromosome . Primary Identifier  IV Chromosome Location . Start  16738912
Chromosome Location . End  16743259 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y51H4A.25e.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00013119 Y51H4A.25 Y51H4A.25 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y51H4A.25e Y51H4A.25e 1692   IV: 16738912-16739049

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:Y51H4A.25e.1 16738912 16743259 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

11 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon165662   138   IV: 16738912-16739049 Caenorhabditis elegans
Exon165669   129   IV: 16740160-16740288 Caenorhabditis elegans
Exon165673   109   IV: 16740336-16740444 Caenorhabditis elegans
Exon165679   146   IV: 16741169-16741314 Caenorhabditis elegans
Exon165682   310   IV: 16741362-16741671 Caenorhabditis elegans
Exon165685   261   IV: 16741747-16742007 Caenorhabditis elegans
Exon165688   143   IV: 16742052-16742194 Caenorhabditis elegans
Exon165691   119   IV: 16742238-16742356 Caenorhabditis elegans
Exon165694   127   IV: 16742396-16742522 Caenorhabditis elegans
Exon165697   120   IV: 16742824-16742943 Caenorhabditis elegans
Exon165701   268   IV: 16742992-16743259 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:Y51H4A.25e.1 16738912 16743259 1

1 Sequence

Length
1870

1 Sequence Ontology Term

Identifier Name Description
transcript