WormMine

WS297

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:Y51H4A.25a.1 Sequence Name  Y51H4A.25a.1
Length (nt)  1713   Chromosome Location  IV: 16740172-16743252
Chromosome . Primary Identifier  IV Chromosome Location . Start  16740172
Chromosome Location . End  16743252 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y51H4A.25a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00013119 Y51H4A.25 Y51H4A.25 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y51H4A.25a Y51H4A.25a 1542   IV: 16740172-16740288

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:Y51H4A.25a.1 16740172 16743252 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

10 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon165671   117   IV: 16740172-16740288 Caenorhabditis elegans
Exon165672   109   IV: 16740336-16740444 Caenorhabditis elegans
Exon165678   146   IV: 16741169-16741314 Caenorhabditis elegans
Exon165681   310   IV: 16741362-16741671 Caenorhabditis elegans
Exon165684   261   IV: 16741747-16742007 Caenorhabditis elegans
Exon165687   143   IV: 16742052-16742194 Caenorhabditis elegans
Exon165690   119   IV: 16742238-16742356 Caenorhabditis elegans
Exon165693   127   IV: 16742396-16742522 Caenorhabditis elegans
Exon165696   120   IV: 16742824-16742943 Caenorhabditis elegans
Exon165700   261   IV: 16742992-16743252 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:Y51H4A.25a.1 16740172 16743252 1

1 Sequence

Length
1713

1 Sequence Ontology Term

Identifier Name Description
transcript