WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:Y43D4A.3b.1 Sequence Name  Y43D4A.3b.1
Length (nt)  543   Chromosome Location  IV: 16766598-16767426
Chromosome . Primary Identifier  IV Chromosome Location . Start  16766598
Chromosome Location . End  16767426 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y43D4A.3b.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00012789 Y43D4A.3 Y43D4A.3 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y43D4A.3b Y43D4A.3b 543   IV: 16766598-16766723

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:Y43D4A.3b.1 16766598 16767426 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

6 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon165685   126   IV: 16766598-16766723 Caenorhabditis elegans
Exon165687   57   IV: 16766826-16766882 Caenorhabditis elegans
Exon165689   85   IV: 16766924-16767008 Caenorhabditis elegans
Exon165691   114   IV: 16767062-16767175 Caenorhabditis elegans
Exon165693   146   IV: 16767223-16767368 Caenorhabditis elegans
Exon165695   15   IV: 16767412-16767426 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:Y43D4A.3b.1 16766598 16767426 -1

1 Sequence

Length
543

1 Sequence Ontology Term

Identifier Name Description
transcript