WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:T06A10.1a.1 Sequence Name  T06A10.1a.1
Length (nt)  3006   Chromosome Location  IV: 16855044-16863443
Chromosome . Primary Identifier  IV Chromosome Location . Start  16855044
Chromosome Location . End  16863443 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
T06A10.1a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00020284 mel-46 T06A10.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:T06A10.1a T06A10.1a 2922   IV: 16855123-16855302

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:T06A10.1a.1 16855044 16863443 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

10 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon166107   259   IV: 16855044-16855302 Caenorhabditis elegans
Exon166114   306   IV: 16856052-16856357 Caenorhabditis elegans
Exon166121   1200   IV: 16858330-16859529 Caenorhabditis elegans
Exon166127   424   IV: 16860661-16861084 Caenorhabditis elegans
Exon166133   130   IV: 16861596-16861725 Caenorhabditis elegans
Exon166138   125   IV: 16862392-16862516 Caenorhabditis elegans
Exon166140   139   IV: 16862582-16862720 Caenorhabditis elegans
Exon166143   56   IV: 16862776-16862831 Caenorhabditis elegans
Exon166146   181   IV: 16863028-16863208 Caenorhabditis elegans
Exon166149   186   IV: 16863258-16863443 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:T06A10.1a.1 16855044 16863443 -1

1 Sequence

Length
3006

1 Sequence Ontology Term

Identifier Name Description
transcript