WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:T06A10.4a.1 Sequence Name  T06A10.4a.1
Length (nt)  910   Chromosome Location  IV: 16863870-16865486
Chromosome . Primary Identifier  IV Chromosome Location . Start  16863870
Chromosome Location . End  16865486 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
T06A10.4a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00020287 lsy-13 T06A10.4 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:T06A10.4a T06A10.4a 744   IV: 16863875-16864093

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:T06A10.4a.1 16863870 16865486 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

3 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon166151   224   IV: 16863870-16864093 Caenorhabditis elegans
Exon166152   327   IV: 16864743-16865069 Caenorhabditis elegans
Exon166155   359   IV: 16865128-16865486 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:T06A10.4a.1 16863870 16865486 1

1 Sequence

Length
910

1 Sequence Ontology Term

Identifier Name Description
transcript