WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:T06A10.3a.1 Sequence Name  T06A10.3a.1
Length (nt)  554   Chromosome Location  IV: 16865840-16866504
Chromosome . Primary Identifier  IV Chromosome Location . Start  16865840
Chromosome Location . End  16866504 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
T06A10.3a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00020286 gtsf-1 T06A10.3 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:T06A10.3a T06A10.3a 510   IV: 16865840-16865923

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:T06A10.3a.1 16865840 16866504 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

3 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon166156   84   IV: 16865840-16865923 Caenorhabditis elegans
Exon166157   86   IV: 16865973-16866058 Caenorhabditis elegans
Exon166159   384   IV: 16866121-16866504 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:T06A10.3a.1 16865840 16866504 1

1 Sequence

Length
554

1 Sequence Ontology Term

Identifier Name Description
transcript