WormMine

WS297

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:T06A10.1a Sequence Name  T06A10.1a
Length (nt)  2922   Chromosome Location  IV: 16855123-16855302
Chromosome . Primary Identifier  IV Chromosome Location . Start  16855123
Chromosome Location . End  16855302
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
T06A10.1a

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE41449 MEL-46, isoform a 110.5 973 Caenorhabditis elegans
 

Other

8 RNAi

WormBase ID
WBRNAi00052604
WBRNAi00052605
WBRNAi00018267
WBRNAi00071499
WBRNAi00108475
WBRNAi00026209
WBRNAi00027460
WBRNAi00108474

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:T06A10.1a 16855123 16855302 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00020284 mel-46 T06A10.1 Caenorhabditis elegans

10 Locations


Feature . Primary Identifier
Start End Strand
CDS:T06A10.1a 16855123 16855302 -1
CDS:T06A10.1a 16856052 16856357 -1
CDS:T06A10.1a 16858330 16859529 -1
CDS:T06A10.1a 16860661 16861084 -1
CDS:T06A10.1a 16861596 16861725 -1
CDS:T06A10.1a 16862392 16862516 -1
CDS:T06A10.1a 16862582 16862720 -1
CDS:T06A10.1a 16862776 16862831 -1
CDS:T06A10.1a 16863028 16863208 -1
CDS:T06A10.1a 16863258 16863438 -1

1 Sequence

Length
2922

1 Sequence Ontology Term

Identifier Name Description
CDS  

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:T06A10.1a.1 T06A10.1a.1 3006   IV: 16855044-16863443