WormMine: Gene WBGene00255611

• WormBase Gene ID: WBGene00255611
• Gene Name: Y116A8C.470
• Sequence Name: Y116A8C.470
• Organism: Caenorhabditis elegans
• Biotype: SO:0001217
• Genetic Position: :±
• Length (nt): 162

1 Organism

• Name: Caenorhabditis elegans
• Taxon Id: 6239

1 Synonyms

• Value: WBGene00255611

Genomics

1 Transcripts

WormMine ID	Sequence Name	Length (nt)	Chromosome Location
Transcript:Y116A8C.470.1	Y116A8C.470.1	162	IV: 16919151-16919312

Other

1 CDSs

WormMine ID	Sequence Name	Length (nt)	Chromosome Location
CDS:Y116A8C.470	Y116A8C.470	162	IV: 16919151-16919312

1 RNAi Result

• WBRNAi00055447

17 Allele

• gk964078
• gk964500
• gk962765
• gk963590
• gk963795
• gk962529
• gk963948
• gk963888
• WBVar02122004
• WBVar01669597
• WBVar01669596
• WBVar01669595
• gk634391
• gk314410
• WBVar02004012
• gk222415
• gk222414

1 Chromosome

• WormBase ID: IV
• Organism: Caenorhabditis elegans
• Length (nt): 17493829

1 Chromosome Location

• Feature . Primary Identifier: WBGene00255611
• Start: 16919151
• End: 16919312
• Strand: -1

2 Data Sets

• WormBaseAcedbConverter
• C. elegans genomic annotations (GFF3 Gene)

1 Downstream Intergenic Region

• WormBase ID: intergenic_region_chrIV_16918502..16919150
• Length (nt): 649
• Chromosome Location: IV: 16918502-16919150
• Organism: Caenorhabditis elegans

1 Expression Clusters

Regulated By Treatment	Description	Algorithm	Primary Identifier
	Transcripts that showed significantly decreased expression in dissected female germline comparing to in dissected male germline.	Log2 Fold change > 2 or <-1, p-value < 0.05.	WBPaper00053599:female_vs_male_downregulated

1 Expression Patterns

• Primary Identifier: Expr2007059
• Pattern: Single cell embryonic expression. Only cell types with an expression fraction of greater 0.2 of the maximum expressed fraction are labeled (Full data can be downloaded from http://caltech.wormbase.org/pub/wormbase/datasets-published/packer2019/). The colors represent the broad cell class to which the cell type has been assigned. The size of the point is proportional to the log2 of the numbers of cells in the dataset of that cell type. Interactive visualizations are available as a web app (https://cello.shinyapps.io/celegans/) and can also be installed as an R package (https://github.com/qinzhu/VisCello.celegans).

0 GO Annotation

0 Homologues

1 Locations

• Feature . Primary Identifier: WBGene00255611
• Start: 16919151
• End: 16919312
• Strand: -1

0 Ontology Annotations

0 Regulates Expr Cluster

1 Sequence

• Length: 162

1 Sequence Ontology Term