WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:Y116A8C.4.1 Sequence Name  Y116A8C.4.1
Length (nt)  2257   Chromosome Location  IV: 16920341-16924118
Chromosome . Primary Identifier  IV Chromosome Location . Start  16920341
Chromosome Location . End  16924118 Method  Coding_transcript
Quick Links:
 
Quick Links:
 

1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y116A8C.4.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00013785 nep-23 Y116A8C.4 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y116A8C.4 Y116A8C.4 2145   IV: 16920511-16920774

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:Y116A8C.4.1 16920341 16924118 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

13 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon166364   62   IV: 16920341-16920402 Caenorhabditis elegans
Exon166365   267   IV: 16920508-16920774 Caenorhabditis elegans
Exon166366   130   IV: 16920846-16920975 Caenorhabditis elegans
Exon166367   95   IV: 16921023-16921117 Caenorhabditis elegans
Exon166368   115   IV: 16921172-16921286 Caenorhabditis elegans
Exon166369   230   IV: 16921329-16921558 Caenorhabditis elegans
Exon166370   183   IV: 16921605-16921787 Caenorhabditis elegans
Exon166371   129   IV: 16921876-16922004 Caenorhabditis elegans
Exon166372   255   IV: 16922772-16923026 Caenorhabditis elegans
Exon166373   163   IV: 16923070-16923232 Caenorhabditis elegans
Exon166374   248   IV: 16923277-16923524 Caenorhabditis elegans
Exon166375   159   IV: 16923576-16923734 Caenorhabditis elegans
Exon166376   221   IV: 16923898-16924118 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:Y116A8C.4.1 16920341 16924118 1

1 Sequence

Length
2257

1 Sequence Ontology Term

Identifier Name Description
transcript