WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:Y116A8C.9b.1 Sequence Name  Y116A8C.9b.1
Length (nt)  528   Chromosome Location  IV: 16940445-16943059
Chromosome . Primary Identifier  IV Chromosome Location . Start  16940445
Chromosome Location . End  16943059 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y116A8C.9b.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00013789 Y116A8C.9 Y116A8C.9 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y116A8C.9b Y116A8C.9b 528   IV: 16940445-16940554

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:Y116A8C.9b.1 16940445 16943059 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

4 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon166409   110   IV: 16940445-16940554 Caenorhabditis elegans
Exon166411   163   IV: 16941045-16941207 Caenorhabditis elegans
Exon166413   210   IV: 16942106-16942315 Caenorhabditis elegans
Exon166414   45   IV: 16943015-16943059 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:Y116A8C.9b.1 16940445 16943059 -1

1 Sequence

Length
528

1 Sequence Ontology Term

Identifier Name Description
transcript