WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:Y116A8C.22.1 Sequence Name  Y116A8C.22.1
Length (nt)  954   Chromosome Location  IV: 17046394-17048357
Chromosome . Primary Identifier  IV Chromosome Location . Start  17046394
Chromosome Location . End  17048357 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y116A8C.22.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00013799 athp-3 Y116A8C.22 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y116A8C.22 Y116A8C.22 861   IV: 17046483-17046629

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:Y116A8C.22.1 17046394 17048357 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

4 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon166750   236   IV: 17046394-17046629 Caenorhabditis elegans
Exon166754   201   IV: 17046969-17047169 Caenorhabditis elegans
Exon166756   408   IV: 17047665-17048072 Caenorhabditis elegans
Exon166758   109   IV: 17048249-17048357 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:Y116A8C.22.1 17046394 17048357 -1

1 Sequence

Length
954

1 Sequence Ontology Term

Identifier Name Description
transcript