WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:Y116A8C.42 Sequence Name  Y116A8C.42
Length (nt)  411   Chromosome Location  IV: 17088059-17088134
Chromosome . Primary Identifier  IV Chromosome Location . Start  17088059
Chromosome Location . End  17088134
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y116A8C.42

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE23346 SNR-1 14.8 136 Caenorhabditis elegans
 

Other

32 RNAi

WormBase ID
WBRNAi00095769
WBRNAi00078039
WBRNAi00009290
WBRNAi00083628
WBRNAi00083730
WBRNAi00083819
WBRNAi00075326
WBRNAi00085324
WBRNAi00036615
WBRNAi00026598
WBRNAi00064876
WBRNAi00090993
WBRNAi00075374
WBRNAi00075373
WBRNAi00075372
WBRNAi00075375
WBRNAi00075377
WBRNAi00075376
WBRNAi00071502
WBRNAi00071501
WBRNAi00075327
WBRNAi00055460
WBRNAi00080020
WBRNAi00111878
WBRNAi00111877
WBRNAi00080108
WBRNAi00108870
WBRNAi00108925
WBRNAi00108980
WBRNAi00109035

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:Y116A8C.42 17088059 17088134 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00004914 snr-1 Y116A8C.42 Caenorhabditis elegans

3 Locations


Feature . Primary Identifier
Start End Strand
CDS:Y116A8C.42 17088059 17088134 1
CDS:Y116A8C.42 17088185 17088312 1
CDS:Y116A8C.42 17088364 17088570 1

1 Sequence

Length
411

1 Sequence Ontology Term

Identifier Name Description
CDS  

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:Y116A8C.42.1 Y116A8C.42.1 797   IV: 17088049-17088946