WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:Y116A8C.27a Sequence Name  Y116A8C.27a
Length (nt)  810   Chromosome Location  IV: 17090742-17090960
Chromosome . Primary Identifier  IV Chromosome Location . Start  17090742
Chromosome Location . End  17090960
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y116A8C.27a

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE37421 Y116A8C.27, isoform a 30.4 269 Caenorhabditis elegans
 

Other

2 RNAi

WormBase ID
WBRNAi00055444
WBRNAi00055446

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:Y116A8C.27a 17090742 17090960 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00013804 Y116A8C.27 Y116A8C.27 Caenorhabditis elegans

6 Locations


Feature . Primary Identifier
Start End Strand
CDS:Y116A8C.27a 17090742 17090960 -1
CDS:Y116A8C.27a 17091396 17091496 -1
CDS:Y116A8C.27a 17091575 17091744 -1
CDS:Y116A8C.27a 17092579 17092709 -1
CDS:Y116A8C.27a 17095326 17095430 -1
CDS:Y116A8C.27a 17096178 17096261 -1

1 Sequence

Length
810

1 Sequence Ontology Term

Identifier Name Description
CDS  

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:Y116A8C.27a.1 Y116A8C.27a.1 919   IV: 17090640-17096268