WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:Y116A8C.33b.1 Sequence Name  Y116A8C.33b.1
Length (nt)  1956   Chromosome Location  IV: 17113164-17115417
Chromosome . Primary Identifier  IV Chromosome Location . Start  17113164
Chromosome Location . End  17115417 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y116A8C.33b.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00013809 Y116A8C.33 Y116A8C.33 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y116A8C.33b Y116A8C.33b 1956   IV: 17113164-17115083

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:Y116A8C.33b.1 17113164 17115417 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

2 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon167016   1920   IV: 17113164-17115083 Caenorhabditis elegans
Exon167017   36   IV: 17115382-17115417 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:Y116A8C.33b.1 17113164 17115417 1

1 Sequence

Length
1956

1 Sequence Ontology Term

Identifier Name Description
transcript