WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:Y116A8C.36a Sequence Name  Y116A8C.36a
Length (nt)  3258   Chromosome Location  IV: 17119684-17119833
Chromosome . Primary Identifier  IV Chromosome Location . Start  17119684
Chromosome Location . End  17119833
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y116A8C.36a

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE42665 ITSN-1, isoform a 120.5 1085 Caenorhabditis elegans
 

Other

7 RNAi

WormBase ID
WBRNAi00055454
WBRNAi00019928
WBRNAi00036612
WBRNAi00061915
WBRNAi00075455
WBRNAi00075454
WBRNAi00098505

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:Y116A8C.36a 17119684 17119833 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00006405 itsn-1 Y116A8C.36 Caenorhabditis elegans

8 Locations


Feature . Primary Identifier
Start End Strand
CDS:Y116A8C.36a 17119684 17119833 1
CDS:Y116A8C.36a 17119885 17120469 1
CDS:Y116A8C.36a 17120953 17121414 1
CDS:Y116A8C.36a 17121562 17121786 1
CDS:Y116A8C.36a 17121833 17122463 1
CDS:Y116A8C.36a 17123245 17123615 1
CDS:Y116A8C.36a 17124202 17124518 1
CDS:Y116A8C.36a 17125419 17125935 1

1 Sequence

Length
3258

1 Sequence Ontology Term

Identifier Name Description
CDS  

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:Y116A8C.36a.1 Y116A8C.36a.1 3589   IV: 17119684-17126266