WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:ZK550.3.1 Sequence Name  ZK550.3.1
Length (nt)  2532   Chromosome Location  IV: 17250131-17254964
Chromosome . Primary Identifier  IV Chromosome Location . Start  17250131
Chromosome Location . End  17254964 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
ZK550.3.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00013997 eelo-2 ZK550.3 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:ZK550.3 ZK550.3 2319   IV: 17250133-17250201

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:ZK550.3.1 17250131 17254964 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

17 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon167477   71   IV: 17250131-17250201 Caenorhabditis elegans
Exon167478   95   IV: 17250257-17250351 Caenorhabditis elegans
Exon167479   100   IV: 17250400-17250499 Caenorhabditis elegans
Exon167480   79   IV: 17250548-17250626 Caenorhabditis elegans
Exon167481   152   IV: 17250676-17250827 Caenorhabditis elegans
Exon167482   138   IV: 17250888-17251025 Caenorhabditis elegans
Exon167483   95   IV: 17251267-17251361 Caenorhabditis elegans
Exon167484   105   IV: 17251409-17251513 Caenorhabditis elegans
Exon167485   183   IV: 17251871-17252053 Caenorhabditis elegans
Exon167486   102   IV: 17252103-17252204 Caenorhabditis elegans
Exon167488   144   IV: 17252420-17252563 Caenorhabditis elegans
Exon167489   251   IV: 17252840-17253090 Caenorhabditis elegans
Exon167490   119   IV: 17253499-17253617 Caenorhabditis elegans
Exon167491   171   IV: 17253667-17253837 Caenorhabditis elegans
Exon167492   288   IV: 17253884-17254171 Caenorhabditis elegans
Exon167493   132   IV: 17254271-17254402 Caenorhabditis elegans
Exon167494   307   IV: 17254658-17254964 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:ZK550.3.1 17250131 17254964 1

1 Sequence

Length
2532

1 Sequence Ontology Term

Identifier Name Description
transcript