WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:ZK550.6.1 Sequence Name  ZK550.6.1
Length (nt)  1030   Chromosome Location  IV: 17260307-17262485
Chromosome . Primary Identifier  IV Chromosome Location . Start  17260307
Chromosome Location . End  17262485 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
ZK550.6.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00014000 ZK550.6 ZK550.6 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:ZK550.6 ZK550.6 939   IV: 17260389-17260609

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:ZK550.6.1 17260307 17262485 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

5 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon167512   303   IV: 17260307-17260609 Caenorhabditis elegans
Exon167514   139   IV: 17260907-17261045 Caenorhabditis elegans
Exon167515   182   IV: 17261319-17261500 Caenorhabditis elegans
Exon167519   250   IV: 17261887-17262136 Caenorhabditis elegans
Exon167520   156   IV: 17262330-17262485 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:ZK550.6.1 17260307 17262485 -1

1 Sequence

Length
1030

1 Sequence Ontology Term

Identifier Name Description
transcript