WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F26D10.9a.1 Sequence Name  F26D10.9a.1
Length (nt)  1965   Chromosome Location  IV: 17269342-17272181
Chromosome . Primary Identifier  IV Chromosome Location . Start  17269342
Chromosome Location . End  17272181 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F26D10.9a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00000224 atgp-1 F26D10.9 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F26D10.9a F26D10.9a 1842   IV: 17269343-17269426

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F26D10.9a.1 17269342 17272181 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

10 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon167534   85   IV: 17269342-17269426 Caenorhabditis elegans
Exon167535   101   IV: 17269471-17269571 Caenorhabditis elegans
Exon167536   133   IV: 17269620-17269752 Caenorhabditis elegans
Exon167537   398   IV: 17270087-17270484 Caenorhabditis elegans
Exon167538   166   IV: 17270545-17270710 Caenorhabditis elegans
Exon167539   89   IV: 17270759-17270847 Caenorhabditis elegans
Exon167540   175   IV: 17270898-17271072 Caenorhabditis elegans
Exon167541   303   IV: 17271269-17271571 Caenorhabditis elegans
Exon167543   282   IV: 17271620-17271901 Caenorhabditis elegans
Exon167546   233   IV: 17271949-17272181 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F26D10.9a.1 17269342 17272181 1

1 Sequence

Length
1965

1 Sequence Ontology Term

Identifier Name Description
transcript