WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F26D10.10.1 Sequence Name  F26D10.10.1
Length (nt)  1280   Chromosome Location  IV: 17272231-17273652
Chromosome . Primary Identifier  IV Chromosome Location . Start  17272231
Chromosome Location . End  17273652 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F26D10.10.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00001606 gln-5 F26D10.10 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F26D10.10 F26D10.10 1110   IV: 17272382-17272471

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F26D10.10.1 17272231 17273652 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

4 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon167547   241   IV: 17272231-17272471 Caenorhabditis elegans
Exon167548   328   IV: 17272522-17272849 Caenorhabditis elegans
Exon167549   352   IV: 17272894-17273245 Caenorhabditis elegans
Exon167550   359   IV: 17273294-17273652 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F26D10.10.1 17272231 17273652 -1

1 Sequence

Length
1280

1 Sequence Ontology Term

Identifier Name Description
transcript