WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:T28F3.1a Sequence Name  T28F3.1a
Length (nt)  1905   Chromosome Location  IV: 17281677-17282117
Chromosome . Primary Identifier  IV Chromosome Location . Start  17281677
Chromosome Location . End  17282117
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
T28F3.1a

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE19806 NRA-1, isoform a 71.1 634 Caenorhabditis elegans
 

Other

12 RNAi

WormBase ID
WBRNAi00066754
WBRNAi00054432
WBRNAi00083930
WBRNAi00083929
WBRNAi00066724
WBRNAi00008202
WBRNAi00013924
WBRNAi00019407
WBRNAi00098208
WBRNAi00036096
WBRNAi00066524
WBRNAi00090650

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:T28F3.1a 17281677 17282117 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00012128 nra-1 T28F3.1 Caenorhabditis elegans

9 Locations


Feature . Primary Identifier
Start End Strand
CDS:T28F3.1a 17281677 17282117 -1
CDS:T28F3.1a 17282174 17282516 -1
CDS:T28F3.1a 17282564 17282802 -1
CDS:T28F3.1a 17283004 17283115 -1
CDS:T28F3.1a 17283235 17283276 -1
CDS:T28F3.1a 17283326 17283592 -1
CDS:T28F3.1a 17283638 17283790 -1
CDS:T28F3.1a 17283835 17284071 -1
CDS:T28F3.1a 17284117 17284187 -1

1 Sequence

Length
1905

1 Sequence Ontology Term

Identifier Name Description
CDS  

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:T28F3.1a.1 T28F3.1a.1 2139   IV: 17281455-17284199