WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:T28F3.6.1 Sequence Name  T28F3.6.1
Length (nt)  807   Chromosome Location  IV: 17300809-17302033
Chromosome . Primary Identifier  IV Chromosome Location . Start  17300809
Chromosome Location . End  17302033 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
T28F3.6.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00012132 ifta-2 T28F3.6 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:T28F3.6 T28F3.6 759   IV: 17300857-17301037

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:T28F3.6.1 17300809 17302033 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

5 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon167667   229   IV: 17300809-17301037 Caenorhabditis elegans
Exon167668   204   IV: 17301089-17301292 Caenorhabditis elegans
Exon167669   124   IV: 17301469-17301592 Caenorhabditis elegans
Exon167670   136   IV: 17301673-17301808 Caenorhabditis elegans
Exon167671   114   IV: 17301920-17302033 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:T28F3.6.1 17300809 17302033 -1

1 Sequence

Length
807

1 Sequence Ontology Term

Identifier Name Description
transcript