WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C49C3.4b.1 Sequence Name  C49C3.4b.1
Length (nt)  2949   Chromosome Location  IV: 17323410-17328633
Chromosome . Primary Identifier  IV Chromosome Location . Start  17323410
Chromosome Location . End  17328633 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C49C3.4b.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00008194 C49C3.4 C49C3.4 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C49C3.4b C49C3.4b 2949   IV: 17323410-17323431

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:C49C3.4b.1 17323410 17328633 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

16 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon167734   22   IV: 17323410-17323431 Caenorhabditis elegans
Exon167736   196   IV: 17323684-17323879 Caenorhabditis elegans
Exon167739   91   IV: 17323989-17324079 Caenorhabditis elegans
Exon167742   135   IV: 17324128-17324262 Caenorhabditis elegans
Exon167745   334   IV: 17324468-17324801 Caenorhabditis elegans
Exon167748   116   IV: 17324846-17324961 Caenorhabditis elegans
Exon167751   122   IV: 17325008-17325129 Caenorhabditis elegans
Exon167754   130   IV: 17325179-17325308 Caenorhabditis elegans
Exon167757   628   IV: 17326208-17326835 Caenorhabditis elegans
Exon167760   147   IV: 17326880-17327026 Caenorhabditis elegans
Exon167763   251   IV: 17327204-17327454 Caenorhabditis elegans
Exon167766   139   IV: 17327629-17327767 Caenorhabditis elegans
Exon167769   77   IV: 17327813-17327889 Caenorhabditis elegans
Exon167772   212   IV: 17327936-17328147 Caenorhabditis elegans
Exon167775   161   IV: 17328195-17328355 Caenorhabditis elegans
Exon167777   188   IV: 17328446-17328633 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:C49C3.4b.1 17323410 17328633 1

1 Sequence

Length
2949

1 Sequence Ontology Term

Identifier Name Description
transcript