WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:C49C3.13 Sequence Name  C49C3.13
Length (nt)  1500   Chromosome Location  IV: 17347181-17347322
Chromosome . Primary Identifier  IV Chromosome Location . Start  17347181
Chromosome Location . End  17347322
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C49C3.13

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE40801 CLEC-198 54.1 499 Caenorhabditis elegans
 

Other

5 RNAi

WormBase ID
WBRNAi00042777
WBRNAi00042778
WBRNAi00012120
WBRNAi00012121
WBRNAi00029965

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:C49C3.13 17347181 17347322 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00008203 clec-198 C49C3.13 Caenorhabditis elegans

16 Locations


Feature . Primary Identifier
Start End Strand
CDS:C49C3.13 17347181 17347322 1
CDS:C49C3.13 17347972 17348067 1
CDS:C49C3.13 17348114 17348175 1
CDS:C49C3.13 17348220 17348331 1
CDS:C49C3.13 17348382 17348443 1
CDS:C49C3.13 17348494 17348716 1
CDS:C49C3.13 17348764 17348867 1
CDS:C49C3.13 17349032 17349085 1
CDS:C49C3.13 17349134 17349175 1
CDS:C49C3.13 17349464 17349496 1
CDS:C49C3.13 17349832 17349873 1
CDS:C49C3.13 17349929 17349982 1
CDS:C49C3.13 17350347 17350472 1
CDS:C49C3.13 17350527 17350632 1
CDS:C49C3.13 17350688 17350818 1
CDS:C49C3.13 17350881 17350991 1

1 Sequence

Length
1500

1 Sequence Ontology Term

Identifier Name Description
CDS  

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:C49C3.13.1 C49C3.13.1 1598   IV: 17347168-17351076