WormMine

WS297

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C30H6.1a.1 Sequence Name  C30H6.1a.1
Length (nt)  2230   Chromosome Location  IV: 17351886-17358097
Chromosome . Primary Identifier  IV Chromosome Location . Start  17351886
Chromosome Location . End  17358097 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C30H6.1a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00007820 clec-199 C30H6.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C30H6.1a C30H6.1a 1974   IV: 17351940-17352021

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:C30H6.1a.1 17351886 17358097 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

27 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon167921   136   IV: 17351886-17352021 Caenorhabditis elegans
Exon167937   375   IV: 17352247-17352621 Caenorhabditis elegans
Exon167953   56   IV: 17352672-17352727 Caenorhabditis elegans
Exon167969   105   IV: 17352778-17352882 Caenorhabditis elegans
Exon167985   118   IV: 17353214-17353331 Caenorhabditis elegans
Exon168001   86   IV: 17353378-17353463 Caenorhabditis elegans
Exon168025   42   IV: 17353606-17353647 Caenorhabditis elegans
Exon168041   39   IV: 17353874-17353912 Caenorhabditis elegans
Exon168049   24   IV: 17353958-17353981 Caenorhabditis elegans
Exon168065   48   IV: 17354034-17354081 Caenorhabditis elegans
Exon168081   21   IV: 17354129-17354149 Caenorhabditis elegans
Exon168097   33   IV: 17354408-17354440 Caenorhabditis elegans
Exon168105   54   IV: 17354911-17354964 Caenorhabditis elegans
Exon168121   36   IV: 17355280-17355315 Caenorhabditis elegans
Exon168137   42   IV: 17355383-17355424 Caenorhabditis elegans
Exon168153   42   IV: 17355467-17355508 Caenorhabditis elegans
Exon168169   42   IV: 17355718-17355759 Caenorhabditis elegans
Exon168185   42   IV: 17355806-17355847 Caenorhabditis elegans
Exon168201   51   IV: 17355981-17356031 Caenorhabditis elegans
Exon168219   39   IV: 17356132-17356170 Caenorhabditis elegans
Exon168235   33   IV: 17356431-17356463 Caenorhabditis elegans
Exon168251   42   IV: 17356549-17356590 Caenorhabditis elegans
Exon168267   42   IV: 17356906-17356947 Caenorhabditis elegans
Exon168276   162   IV: 17357211-17357372 Caenorhabditis elegans
Exon168292   106   IV: 17357420-17357525 Caenorhabditis elegans
Exon168308   104   IV: 17357601-17357704 Caenorhabditis elegans
Exon168339   310   IV: 17357788-17358097 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:C30H6.1a.1 17351886 17358097 1

1 Sequence

Length
2230

1 Sequence Ontology Term

Identifier Name Description
transcript