WormMine

WS297

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C30H6.1b.1 Sequence Name  C30H6.1b.1
Length (nt)  1932   Chromosome Location  IV: 17351940-17357895
Chromosome . Primary Identifier  IV Chromosome Location . Start  17351940
Chromosome Location . End  17357895 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C30H6.1b.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00007820 clec-199 C30H6.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C30H6.1b C30H6.1b 1932   IV: 17351940-17352021

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:C30H6.1b.1 17351940 17357895 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

26 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon167922   82   IV: 17351940-17352021 Caenorhabditis elegans
Exon167938   375   IV: 17352247-17352621 Caenorhabditis elegans
Exon167954   56   IV: 17352672-17352727 Caenorhabditis elegans
Exon167970   105   IV: 17352778-17352882 Caenorhabditis elegans
Exon167986   118   IV: 17353214-17353331 Caenorhabditis elegans
Exon168002   86   IV: 17353378-17353463 Caenorhabditis elegans
Exon168026   42   IV: 17353606-17353647 Caenorhabditis elegans
Exon168042   39   IV: 17353874-17353912 Caenorhabditis elegans
Exon168050   24   IV: 17353958-17353981 Caenorhabditis elegans
Exon168066   48   IV: 17354034-17354081 Caenorhabditis elegans
Exon168082   21   IV: 17354129-17354149 Caenorhabditis elegans
Exon168098   33   IV: 17354408-17354440 Caenorhabditis elegans
Exon168106   54   IV: 17354911-17354964 Caenorhabditis elegans
Exon168122   36   IV: 17355280-17355315 Caenorhabditis elegans
Exon168138   42   IV: 17355383-17355424 Caenorhabditis elegans
Exon168154   42   IV: 17355467-17355508 Caenorhabditis elegans
Exon168170   42   IV: 17355718-17355759 Caenorhabditis elegans
Exon168186   42   IV: 17355806-17355847 Caenorhabditis elegans
Exon168202   51   IV: 17355981-17356031 Caenorhabditis elegans
Exon168220   39   IV: 17356132-17356170 Caenorhabditis elegans
Exon168236   33   IV: 17356431-17356463 Caenorhabditis elegans
Exon168252   42   IV: 17356549-17356590 Caenorhabditis elegans
Exon168277   162   IV: 17357211-17357372 Caenorhabditis elegans
Exon168293   106   IV: 17357420-17357525 Caenorhabditis elegans
Exon168309   104   IV: 17357601-17357704 Caenorhabditis elegans
Exon168324   108   IV: 17357788-17357895 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:C30H6.1b.1 17351940 17357895 1

1 Sequence

Length
1932

1 Sequence Ontology Term

Identifier Name Description
transcript