WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C30H6.1j.1 Sequence Name  C30H6.1j.1
Length (nt)  1932   Chromosome Location  IV: 17351940-17357895
Chromosome . Primary Identifier  IV Chromosome Location . Start  17351940
Chromosome Location . End  17357895 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C30H6.1j.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00007820 clec-199 C30H6.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C30H6.1j C30H6.1j 1932   IV: 17351940-17352021

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:C30H6.1j.1 17351940 17357895 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

26 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon167874   82   IV: 17351940-17352021 Caenorhabditis elegans
Exon167890   375   IV: 17352247-17352621 Caenorhabditis elegans
Exon167906   56   IV: 17352672-17352727 Caenorhabditis elegans
Exon167922   105   IV: 17352778-17352882 Caenorhabditis elegans
Exon167938   118   IV: 17353214-17353331 Caenorhabditis elegans
Exon167954   86   IV: 17353378-17353463 Caenorhabditis elegans
Exon167968   30   IV: 17353527-17353556 Caenorhabditis elegans
Exon167978   42   IV: 17353606-17353647 Caenorhabditis elegans
Exon168002   24   IV: 17353958-17353981 Caenorhabditis elegans
Exon168018   48   IV: 17354034-17354081 Caenorhabditis elegans
Exon168034   21   IV: 17354129-17354149 Caenorhabditis elegans
Exon168058   54   IV: 17354911-17354964 Caenorhabditis elegans
Exon168074   36   IV: 17355280-17355315 Caenorhabditis elegans
Exon168090   42   IV: 17355383-17355424 Caenorhabditis elegans
Exon168106   42   IV: 17355467-17355508 Caenorhabditis elegans
Exon168122   42   IV: 17355718-17355759 Caenorhabditis elegans
Exon168138   42   IV: 17355806-17355847 Caenorhabditis elegans
Exon168154   51   IV: 17355981-17356031 Caenorhabditis elegans
Exon168172   39   IV: 17356132-17356170 Caenorhabditis elegans
Exon168188   33   IV: 17356431-17356463 Caenorhabditis elegans
Exon168204   42   IV: 17356549-17356590 Caenorhabditis elegans
Exon168216   42   IV: 17356906-17356947 Caenorhabditis elegans
Exon168229   162   IV: 17357211-17357372 Caenorhabditis elegans
Exon168245   106   IV: 17357420-17357525 Caenorhabditis elegans
Exon168261   104   IV: 17357601-17357704 Caenorhabditis elegans
Exon168276   108   IV: 17357788-17357895 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:C30H6.1j.1 17351940 17357895 1

1 Sequence

Length
1932

1 Sequence Ontology Term

Identifier Name Description
transcript