WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C30H6.1k.1 Sequence Name  C30H6.1k.1
Length (nt)  1890   Chromosome Location  IV: 17351940-17357895
Chromosome . Primary Identifier  IV Chromosome Location . Start  17351940
Chromosome Location . End  17357895 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C30H6.1k.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00007820 clec-199 C30H6.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C30H6.1k C30H6.1k 1890   IV: 17351940-17352021

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:C30H6.1k.1 17351940 17357895 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

25 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon167875   82   IV: 17351940-17352021 Caenorhabditis elegans
Exon167891   375   IV: 17352247-17352621 Caenorhabditis elegans
Exon167907   56   IV: 17352672-17352727 Caenorhabditis elegans
Exon167923   105   IV: 17352778-17352882 Caenorhabditis elegans
Exon167939   118   IV: 17353214-17353331 Caenorhabditis elegans
Exon167955   86   IV: 17353378-17353463 Caenorhabditis elegans
Exon167969   30   IV: 17353527-17353556 Caenorhabditis elegans
Exon167979   42   IV: 17353606-17353647 Caenorhabditis elegans
Exon168003   24   IV: 17353958-17353981 Caenorhabditis elegans
Exon168019   48   IV: 17354034-17354081 Caenorhabditis elegans
Exon168035   21   IV: 17354129-17354149 Caenorhabditis elegans
Exon168059   54   IV: 17354911-17354964 Caenorhabditis elegans
Exon168075   36   IV: 17355280-17355315 Caenorhabditis elegans
Exon168091   42   IV: 17355383-17355424 Caenorhabditis elegans
Exon168107   42   IV: 17355467-17355508 Caenorhabditis elegans
Exon168123   42   IV: 17355718-17355759 Caenorhabditis elegans
Exon168139   42   IV: 17355806-17355847 Caenorhabditis elegans
Exon168155   51   IV: 17355981-17356031 Caenorhabditis elegans
Exon168173   39   IV: 17356132-17356170 Caenorhabditis elegans
Exon168189   33   IV: 17356431-17356463 Caenorhabditis elegans
Exon168205   42   IV: 17356549-17356590 Caenorhabditis elegans
Exon168230   162   IV: 17357211-17357372 Caenorhabditis elegans
Exon168246   106   IV: 17357420-17357525 Caenorhabditis elegans
Exon168262   104   IV: 17357601-17357704 Caenorhabditis elegans
Exon168277   108   IV: 17357788-17357895 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:C30H6.1k.1 17351940 17357895 1

1 Sequence

Length
1890

1 Sequence Ontology Term

Identifier Name Description
transcript